PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_2AS_1AFFE8DA6.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 44aa    MW: 5403.9 Da    PI: 10.5225
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_2AS_1AFFE8DA6.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.22.1e-102244224
                           --SS-EEEEEEE--TT-SS-EEE CS
                   WRKY  2 dDgynWrKYGqKevkgsefprsY 24
                            Dg++WrKYGqK+++g e++r+Y
  Traes_2AS_1AFFE8DA6.1 22 YDGHHWRKYGQKNINGREHARHY 44
                           59********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-10744IPR003657WRKY domain
SuperFamilySSF1182903.27E-91544IPR003657WRKY domain
PROSITE profilePS508119.2132344IPR003657WRKY domain
PfamPF031065.4E-82344IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 44 aa     Download sequence    Send to blast
DEYRGRNNDK RSRSLVTVVP HYDGHHWRKY GQKNINGREH ARHY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002450152.12e-18hypothetical protein SORBIDRAFT_05g001210
TrEMBLW5AZV72e-25W5AZV7_WHEAT; Uncharacterized protein
STRINGSb05g001210.17e-18(Sorghum bicolor)
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]